Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Mir125a-201ENSMUST00000083545 68 ntBASIC11.52□□□□□ -0.57
Sox21Q811W0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox21Q811W0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox21Q811W0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm24694-201ENSMUST00000180054 110 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm27663-201ENSMUST00000184839 110 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm7653-201ENSMUST00000214567 508 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox21Q811W0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm20445-201ENSMUST00000061905 565 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox21Q811W0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sox21Q811W0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.51□□□□□ -0.57
Sox21Q811W0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox21Q811W0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm6912-201ENSMUST00000117218 544 ntBASIC11.5□□□□□ -0.57
Sox21Q811W0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox21Q811W0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.5□□□□□ -0.57
Sox21Q811W0 Gm9182-201ENSMUST00000217829 639 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms