Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh3tc2Q80VA5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gm27839-201ENSMUST00000184242 106 ntBASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gm45841-201ENSMUST00000207700 164 ntBASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3tc2Q80VA5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3tc2Q80VA5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Gm12390-201ENSMUST00000117897 397 ntBASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh3tc2Q80VA5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh3tc2Q80VA5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3tc2Q80VA5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3tc2Q80VA5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms