Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Mir6977-201ENSMUST00000184960 64 ntBASIC14.53□□□□□ -0.08
Trim62Q80V85 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim62Q80V85 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim62Q80V85 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim62Q80V85 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim62Q80V85 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trim62Q80V85 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.52□□□□□ -0.08
Trim62Q80V85 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.52□□□□□ -0.08
Trim62Q80V85 Syt7-204ENSMUST00000223586 1344 ntBASIC14.52□□□□□ -0.08
Trim62Q80V85 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim62Q80V85 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim62Q80V85 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim62Q80V85 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Gm6912-201ENSMUST00000117218 544 ntBASIC14.51□□□□□ -0.09
Trim62Q80V85 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.51□□□□□ -0.09
Trim62Q80V85 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim62Q80V85 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim62Q80V85 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim62Q80V85 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim62Q80V85 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.5□□□□□ -0.09
Trim62Q80V85 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim62Q80V85 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms