Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpp38Q80UU2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rpp38Q80UU2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rpp38Q80UU2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Mir698-201ENSMUST00000102164 109 ntBASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpp38Q80UU2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14□□□□□ -0.17
Rpp38Q80UU2 Gm44719-201ENSMUST00000206404 149 ntBASIC14□□□□□ -0.17
Rpp38Q80UU2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14□□□□□ -0.17
Rpp38Q80UU2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpp38Q80UU2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Rpp38Q80UU2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms