Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm7774-201ENSMUST00000200064 533 ntBASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm44608-201ENSMUST00000206827 855 ntBASIC13.7□□□□□ -0.22
Scn4bQ7M729 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.7□□□□□ -0.22
Scn4bQ7M729 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn4bQ7M729 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.69□□□□□ -0.22
Scn4bQ7M729 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn4bQ7M729 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.68□□□□□ -0.22
Scn4bQ7M729 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 AA543401-201ENSMUST00000164248 1269 ntBASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.68□□□□□ -0.22
Scn4bQ7M729 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn4bQ7M729 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms