Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Gm12585-201ENSMUST00000117307 290 ntBASIC14.79□□□□□ -0.04
Scube3Q66PY1 Gm15393-201ENSMUST00000120499 219 ntBASIC14.79□□□□□ -0.04
Scube3Q66PY1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Gm27838-201ENSMUST00000184829 128 ntBASIC14.79□□□□□ -0.04
Scube3Q66PY1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.79□□□□□ -0.04
Scube3Q66PY1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scube3Q66PY1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm14719-201ENSMUST00000121891 340 ntBASIC14.78□□□□□ -0.04
Scube3Q66PY1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm21470-201ENSMUST00000187680 696 ntBASIC14.78□□□□□ -0.04
Scube3Q66PY1 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.78□□□□□ -0.04
Scube3Q66PY1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.78□□□□□ -0.04
Scube3Q66PY1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scube3Q66PY1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.77□□□□□ -0.04
Scube3Q66PY1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.77□□□□□ -0.04
Scube3Q66PY1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scube3Q66PY1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Gm29667-201ENSMUST00000190817 490 ntBASIC14.77□□□□□ -0.05
Scube3Q66PY1 Gm37714-201ENSMUST00000194742 342 ntBASIC14.77□□□□□ -0.05
Scube3Q66PY1 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Scube3Q66PY1 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms