Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
Notch3Q61982 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.83□□□□□ -0.68
Notch3Q61982 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Notch3Q61982 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Notch3Q61982 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Notch3Q61982 Mir1247-201ENSMUST00000116706 82 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Gm9522-201ENSMUST00000182394 926 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Gm8515-201ENSMUST00000194852 576 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Gm18624-201ENSMUST00000220966 658 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
Notch3Q61982 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Notch3Q61982 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.83□□□□□ -0.68
Notch3Q61982 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.83□□□□□ -0.68
Notch3Q61982 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Notch3Q61982 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Notch3Q61982 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Notch3Q61982 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Notch3Q61982 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.82□□□□□ -0.68
Notch3Q61982 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Notch3Q61982 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.82□□□□□ -0.68
Notch3Q61982 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Notch3Q61982 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.82□□□□□ -0.68
Notch3Q61982 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.82□□□□□ -0.68
Notch3Q61982 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Notch3Q61982 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms