Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Vsx2Q61412 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.73□□□□□ -0.21
Vsx2Q61412 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.73□□□□□ -0.21
Vsx2Q61412 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vsx2Q61412 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vsx2Q61412 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.72□□□□□ -0.21
Vsx2Q61412 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vsx2Q61412 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.71□□□□□ -0.21
Vsx2Q61412 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vsx2Q61412 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vsx2Q61412 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
Vsx2Q61412 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.71□□□□□ -0.22
Vsx2Q61412 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Vsx2Q61412 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.71□□□□□ -0.22
Vsx2Q61412 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vsx2Q61412 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vsx2Q61412 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.7□□□□□ -0.22
Vsx2Q61412 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms