Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vmn1r223Q5SSA0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gm27702-201ENSMUST00000184512 56 ntBASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vmn1r223Q5SSA0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gm45747-201ENSMUST00000212203 999 ntBASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vmn1r223Q5SSA0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms