Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-3Q5R1C3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-3Q5R1C3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-3Q5R1C3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms