Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.19□□□□□ -0.3
Trim40Q3UWA4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim40Q3UWA4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm45167-201ENSMUST00000208007 322 ntBASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm9182-201ENSMUST00000217829 639 ntBASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim40Q3UWA4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms