Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm9387-201ENSMUST00000098624 1320 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm21009-201ENSMUST00000197169 1669 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Defa-ps17-201ENSMUST00000121849 171 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 CT009713.8-201ENSMUST00000225448 560 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm12380-201ENSMUST00000119012 544 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm7278-201ENSMUST00000119836 1401 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Ush2AQ2QI47 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm4366-201ENSMUST00000201488 1342 ntBASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Rprl1-202ENSMUST00000198476 238 ntBASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ush2AQ2QI47 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ush2AQ2QI47 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms