Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Gm12752-201ENSMUST00000121657 811 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Atf4Q06507 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Gm29667-201ENSMUST00000190817 490 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Zmym2-202ENSMUST00000223669 1281 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Gm6180-201ENSMUST00000065243 498 ntBASIC13.49□□□□□ -0.25
Atf4Q06507 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Atf4Q06507 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf4Q06507 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Atf4Q06507 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Atf4Q06507 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Atf4Q06507 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Atf4Q06507 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Atf4Q06507 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.48□□□□□ -0.25
Atf4Q06507 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.48□□□□□ -0.25
Atf4Q06507 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Gm6218-201ENSMUST00000219812 628 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
Atf4Q06507 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.48□□□□□ -0.25
Atf4Q06507 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atf4Q06507 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.48□□□□□ -0.25
Atf4Q06507 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Atf4Q06507 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Atf4Q06507 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.47□□□□□ -0.25
Atf4Q06507 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Atf4Q06507 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atf4Q06507 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Atf4Q06507 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.47□□□□□ -0.25
Atf4Q06507 Gm37785-201ENSMUST00000195783 2408 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms