Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.05□□□□□ -0.48
Smn1P97801 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.05□□□□□ -0.48
Smn1P97801 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.05□□□□□ -0.48
Smn1P97801 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smn1P97801 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.05□□□□□ -0.48
Smn1P97801 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.05□□□□□ -0.48
Smn1P97801 Gm45747-201ENSMUST00000212203 999 ntBASIC12.05□□□□□ -0.48
Smn1P97801 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smn1P97801 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.05□□□□□ -0.48
Smn1P97801 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smn1P97801 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smn1P97801 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.04□□□□□ -0.48
Smn1P97801 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Gm15483-201ENSMUST00000120338 456 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Thap2-203ENSMUST00000218989 527 ntBASIC12.04□□□□□ -0.48
Smn1P97801 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smn1P97801 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smn1P97801 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smn1P97801 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smn1P97801 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smn1P97801 Gm10275-202ENSMUST00000168697 495 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms