Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1aP97445 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cacna1aP97445 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm26464-201ENSMUST00000157094 305 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm24644-201ENSMUST00000157114 139 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm43822-201ENSMUST00000200285 476 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Gm29787-201ENSMUST00000222129 849 ntBASIC12.95□□□□□ -0.34
Cacna1aP97445 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cacna1aP97445 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cacna1aP97445 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm11814-201ENSMUST00000119515 929 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.94□□□□□ -0.34
Cacna1aP97445 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm15429-201ENSMUST00000151268 798 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm6013-201ENSMUST00000212264 699 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.94□□□□□ -0.34
Cacna1aP97445 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cacna1aP97445 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Gm12928-201ENSMUST00000117115 573 ntBASIC12.93□□□□□ -0.34
Cacna1aP97445 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.93□□□□□ -0.34
Cacna1aP97445 Gm43118-201ENSMUST00000199149 775 ntBASIC12.93□□□□□ -0.34
Cacna1aP97445 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Gm18027-201ENSMUST00000218947 619 ntBASIC12.93□□□□□ -0.34
Cacna1aP97445 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.93□□□□□ -0.34
Cacna1aP97445 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cacna1aP97445 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cacna1aP97445 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms