Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3aP84244 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.52□□□□□ -0.41
H3f3aP84244 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H3f3aP84244 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.52□□□□□ -0.41
H3f3aP84244 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Gm8584-201ENSMUST00000171982 758 ntBASIC12.52□□□□□ -0.41
H3f3aP84244 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Gm3436-201ENSMUST00000179930 840 ntBASIC12.52□□□□□ -0.41
H3f3aP84244 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.52□□□□□ -0.41
H3f3aP84244 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H3f3aP84244 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H3f3aP84244 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3aP84244 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.51□□□□□ -0.41
H3f3aP84244 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
H3f3aP84244 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H3f3aP84244 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H3f3aP84244 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.51□□□□□ -0.41
H3f3aP84244 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H3f3aP84244 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
H3f3aP84244 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H3f3aP84244 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H3f3aP84244 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
H3f3aP84244 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H3f3aP84244 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
H3f3aP84244 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Gm15460-201ENSMUST00000118147 391 ntBASIC12.5□□□□□ -0.41
H3f3aP84244 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.5□□□□□ -0.41
H3f3aP84244 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.5□□□□□ -0.41
H3f3aP84244 Mir7023-201ENSMUST00000185093 64 ntBASIC12.5□□□□□ -0.41
H3f3aP84244 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.5□□□□□ -0.41
H3f3aP84244 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
H3f3aP84244 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.5□□□□□ -0.41
H3f3aP84244 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.5□□□□□ -0.41
H3f3aP84244 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.5□□□□□ -0.41
H3f3aP84244 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H3f3aP84244 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms