Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.02□□□□□ -0.17
Ldb1P70662 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Gm9719-201ENSMUST00000162765 543 ntBASIC14.02□□□□□ -0.17
Ldb1P70662 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ldb1P70662 Mir125a-201ENSMUST00000083545 68 ntBASIC14.02□□□□□ -0.17
Ldb1P70662 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ldb1P70662 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ldb1P70662 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.02□□□□□ -0.17
Ldb1P70662 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ldb1P70662 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.01□□□□□ -0.17
Ldb1P70662 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ldb1P70662 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ldb1P70662 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.01□□□□□ -0.17
Ldb1P70662 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.01□□□□□ -0.17
Ldb1P70662 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm8396-201ENSMUST00000057361 823 ntBASIC14.01□□□□□ -0.17
Ldb1P70662 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ldb1P70662 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.01□□□□□ -0.17
Ldb1P70662 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ldb1P70662 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ldb1P70662 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ldb1P70662 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14□□□□□ -0.17
Ldb1P70662 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ldb1P70662 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Ldb1P70662 Gm42471-201ENSMUST00000201457 1865 ntBASIC14□□□□□ -0.17
Ldb1P70662 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14□□□□□ -0.17
Ldb1P70662 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14□□□□□ -0.17
Ldb1P70662 Gm25948-201ENSMUST00000175334 112 ntBASIC14□□□□□ -0.17
Ldb1P70662 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14□□□□□ -0.17
Ldb1P70662 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ldb1P70662 Gm12020-201ENSMUST00000119030 2042 ntBASIC14□□□□□ -0.17
Ldb1P70662 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Gm8410-201ENSMUST00000117225 605 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.99□□□□□ -0.17
Ldb1P70662 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Gm38294-201ENSMUST00000192831 381 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 AA619741-201ENSMUST00000195095 646 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Dupd1-202ENSMUST00000224735 548 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.99□□□□□ -0.17
Ldb1P70662 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.99□□□□□ -0.17
Ldb1P70662 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ldb1P70662 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms