Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.03□□□□□ -0.8
Rpl39P62892 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.03□□□□□ -0.8
Rpl39P62892 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rpl39P62892 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rpl39P62892 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.02□□□□□ -0.81
Rpl39P62892 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Gm11764-201ENSMUST00000120221 623 ntBASIC10.02□□□□□ -0.81
Rpl39P62892 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Rpl39P62892 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.02□□□□□ -0.81
Rpl39P62892 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.02□□□□□ -0.81
Rpl39P62892 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.02□□□□□ -0.81
Rpl39P62892 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Rpl39P62892 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Rpl39P62892 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rpl39P62892 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Rpl39P62892 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Gm15173-201ENSMUST00000122049 433 ntBASIC10.01□□□□□ -0.81
Rpl39P62892 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.01□□□□□ -0.81
Rpl39P62892 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Rpl39P62892 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Rpl39P62892 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.01□□□□□ -0.81
Rpl39P62892 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.01□□□□□ -0.81
Rpl39P62892 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rpl39P62892 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rpl39P62892 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rpl39P62892 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms