Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tpm1P58771 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm1P58771 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tpm1P58771 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Gm7862-201ENSMUST00000121461 292 ntBASIC15.68■□□□□ 0.1
Tpm1P58771 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.68■□□□□ 0.1
Tpm1P58771 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.68■□□□□ 0.1
Tpm1P58771 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.68■□□□□ 0.1
Tpm1P58771 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.68■□□□□ 0.1
Tpm1P58771 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.68■□□□□ 0.1
Tpm1P58771 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.68■□□□□ 0.1
Tpm1P58771 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm1P58771 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tpm1P58771 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.67■□□□□ 0.1
Tpm1P58771 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.67■□□□□ 0.1
Tpm1P58771 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm1P58771 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tpm1P58771 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.66■□□□□ 0.1
Tpm1P58771 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Tpm1P58771 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.66■□□□□ 0.1
Tpm1P58771 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.66■□□□□ 0.1
Tpm1P58771 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.66■□□□□ 0.1
Tpm1P58771 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.66■□□□□ 0.1
Tpm1P58771 Gm10060-201ENSMUST00000212002 111 ntBASIC15.66■□□□□ 0.1
Tpm1P58771 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.66■□□□□ 0.1
Tpm1P58771 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.66■□□□□ 0.1
Tpm1P58771 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.66■□□□□ 0.1
Tpm1P58771 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tpm1P58771 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.66■□□□□ 0.1
Tpm1P58771 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms