Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ctdsp1P58466 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.95□□□□□ -0.66
Ctdsp1P58466 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ctdsp1P58466 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gm2451-201ENSMUST00000199447 999 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gm10290-201ENSMUST00000200451 999 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.94□□□□□ -0.66
Ctdsp1P58466 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Ctdsp1P58466 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Paupar-201ENSMUST00000194826 3482 ntBASIC10.93□□□□□ -0.66
Ctdsp1P58466 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Gm13836-201ENSMUST00000121159 501 ntBASIC10.93□□□□□ -0.66
Ctdsp1P58466 Gm12441-201ENSMUST00000121806 588 ntBASIC10.93□□□□□ -0.66
Ctdsp1P58466 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.93□□□□□ -0.66
Ctdsp1P58466 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.93□□□□□ -0.66
Ctdsp1P58466 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.93□□□□□ -0.66
Ctdsp1P58466 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms