Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Sssca1P56873 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.37□□□□□ -0.59
Sssca1P56873 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sssca1P56873 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Gm27301-201ENSMUST00000184012 127 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Gm7977-201ENSMUST00000193787 748 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Sssca1P56873 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sssca1P56873 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.36□□□□□ -0.59
Sssca1P56873 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sssca1P56873 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Mir5126-201ENSMUST00000175513 77 ntBASIC11.35□□□□□ -0.59
Sssca1P56873 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Gm28659-201ENSMUST00000188013 759 ntBASIC11.35□□□□□ -0.59
Sssca1P56873 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.35□□□□□ -0.59
Sssca1P56873 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Sssca1P56873 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Sssca1P56873 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Sssca1P56873 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sssca1P56873 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sssca1P56873 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sssca1P56873 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms