Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Gm27572-201ENSMUST00000183702 255 ntBASIC13.95□□□□□ -0.18
Atxn1P54254 Gm27486-201ENSMUST00000184923 80 ntBASIC13.95□□□□□ -0.18
Atxn1P54254 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Atxn1P54254 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Atxn1P54254 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.95□□□□□ -0.18
Atxn1P54254 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.94□□□□□ -0.18
Atxn1P54254 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Atxn1P54254 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Atxn1P54254 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Atxn1P54254 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Atxn1P54254 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
Atxn1P54254 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Atxn1P54254 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Atxn1P54254 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
Atxn1P54254 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.93□□□□□ -0.18
Atxn1P54254 Gm18307-201ENSMUST00000206864 949 ntBASIC13.93□□□□□ -0.18
Atxn1P54254 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.93□□□□□ -0.18
Atxn1P54254 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.93□□□□□ -0.18
Atxn1P54254 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.93□□□□□ -0.18
Atxn1P54254 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.93□□□□□ -0.18
Atxn1P54254 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Atxn1P54254 Celf4-206ENSMUST00000224553 1729 ntBASIC13.93□□□□□ -0.18
Atxn1P54254 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Atxn1P54254 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.92□□□□□ -0.18
Atxn1P54254 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Gm12585-201ENSMUST00000117307 290 ntBASIC13.92□□□□□ -0.18
Atxn1P54254 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Atxn1P54254 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.92□□□□□ -0.18
Atxn1P54254 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.92□□□□□ -0.18
Atxn1P54254 Gm45098-201ENSMUST00000207179 657 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms