Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox1P53783 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox1P53783 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Snord83b-201ENSMUST00000104546 94 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Gm14028-201ENSMUST00000117434 479 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Gm15957-201ENSMUST00000118893 974 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm4986-201ENSMUST00000119731 549 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm8566-201ENSMUST00000120174 465 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox1P53783 Mir1943-201ENSMUST00000158276 73 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm6222-202ENSMUST00000182143 629 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm26927-201ENSMUST00000182385 965 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm7046-201ENSMUST00000221351 977 ntBASIC14.26□□□□□ -0.13
Sox1P53783 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox1P53783 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox1P53783 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Prob1-201ENSMUST00000097619 3021 ntBASIC14.25□□□□□ -0.13
Sox1P53783 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sox1P53783 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox1P53783 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Gm12217-201ENSMUST00000118858 696 ntBASIC14.25□□□□□ -0.13
Sox1P53783 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox1P53783 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox1P53783 Gm7029-201ENSMUST00000173226 450 ntBASIC14.25□□□□□ -0.13
Sox1P53783 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.25□□□□□ -0.13
Sox1P53783 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox1P53783 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox1P53783 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox1P53783 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox1P53783 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.24□□□□□ -0.13
Sox1P53783 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Gm6023-201ENSMUST00000118217 606 ntBASIC14.24□□□□□ -0.13
Sox1P53783 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms