Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Xcl1P47993 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.09□□□□□ -0.95
Xcl1P47993 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Xcl1P47993 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Xcl1P47993 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Xcl1P47993 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Xcl1P47993 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
Xcl1P47993 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Gm12896-201ENSMUST00000118430 226 ntBASIC9.08□□□□□ -0.96
Xcl1P47993 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC9.08□□□□□ -0.96
Xcl1P47993 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC9.08□□□□□ -0.96
Xcl1P47993 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC9.08□□□□□ -0.96
Xcl1P47993 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC9.08□□□□□ -0.96
Xcl1P47993 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Xcl1P47993 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.08□□□□□ -0.96
Xcl1P47993 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.08□□□□□ -0.96
Xcl1P47993 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.08□□□□□ -0.96
Xcl1P47993 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Xcl1P47993 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Xcl1P47993 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Xcl1P47993 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Xcl1P47993 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Gm29361-201ENSMUST00000183323 2000 ntBASIC9.07□□□□□ -0.96
Xcl1P47993 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.07□□□□□ -0.96
Xcl1P47993 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.07□□□□□ -0.96
Xcl1P47993 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC9.07□□□□□ -0.96
Xcl1P47993 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC9.07□□□□□ -0.96
Xcl1P47993 Gm10033-202ENSMUST00000211874 928 ntBASIC9.07□□□□□ -0.96
Xcl1P47993 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC9.07□□□□□ -0.96
Xcl1P47993 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Xcl1P47993 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Xcl1P47993 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms