Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4bP46467 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps4bP46467 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.26□□□□□ -0.13
Vps4bP46467 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4bP46467 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.26□□□□□ -0.13
Vps4bP46467 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4bP46467 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4bP46467 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.26□□□□□ -0.13
Vps4bP46467 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.26□□□□□ -0.13
Vps4bP46467 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.26□□□□□ -0.13
Vps4bP46467 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4bP46467 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Vps4bP46467 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.25□□□□□ -0.13
Vps4bP46467 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps4bP46467 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps4bP46467 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Vps4bP46467 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4bP46467 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps4bP46467 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4bP46467 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps4bP46467 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps4bP46467 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vps4bP46467 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4bP46467 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.24□□□□□ -0.13
Vps4bP46467 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps4bP46467 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps4bP46467 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps4bP46467 Gm29310-201ENSMUST00000185468 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21825-201ENSMUST00000185728 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm29109-201ENSMUST00000185895 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21896-201ENSMUST00000186520 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21873-201ENSMUST00000186728 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21794-201ENSMUST00000187056 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21880-201ENSMUST00000187275 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21826-201ENSMUST00000187451 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21198-201ENSMUST00000188393 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21749-201ENSMUST00000189343 696 ntBASIC14.24□□□□□ -0.13
Vps4bP46467 Gm21901-201ENSMUST00000189568 696 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms