Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox18P43680 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.49□□□□□ -0.25
Sox18P43680 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox18P43680 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.49□□□□□ -0.25
Sox18P43680 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox18P43680 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox18P43680 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox18P43680 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.49□□□□□ -0.25
Sox18P43680 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Gm27514-201ENSMUST00000183692 110 ntBASIC13.49□□□□□ -0.25
Sox18P43680 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.49□□□□□ -0.25
Sox18P43680 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox18P43680 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox18P43680 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox18P43680 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox18P43680 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox18P43680 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.48□□□□□ -0.25
Sox18P43680 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC13.48□□□□□ -0.25
Sox18P43680 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Sox18P43680 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.48□□□□□ -0.25
Sox18P43680 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.48□□□□□ -0.25
Sox18P43680 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox18P43680 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.48□□□□□ -0.25
Sox18P43680 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox18P43680 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Sox18P43680 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox18P43680 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms