Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.56□□□□□ -0.24
Tnfsf4P43488 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gm12260-201ENSMUST00000122447 411 ntBASIC13.56□□□□□ -0.24
Tnfsf4P43488 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gm17271-201ENSMUST00000165535 355 ntBASIC13.56□□□□□ -0.24
Tnfsf4P43488 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.56□□□□□ -0.24
Tnfsf4P43488 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.56□□□□□ -0.24
Tnfsf4P43488 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Tnfsf4P43488 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf4P43488 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.55□□□□□ -0.24
Tnfsf4P43488 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Gm15957-201ENSMUST00000118893 974 ntBASIC13.55□□□□□ -0.24
Tnfsf4P43488 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.55□□□□□ -0.24
Tnfsf4P43488 Gm44608-201ENSMUST00000206827 855 ntBASIC13.55□□□□□ -0.24
Tnfsf4P43488 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf4P43488 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Gm2810-201ENSMUST00000118681 990 ntBASIC13.54□□□□□ -0.24
Tnfsf4P43488 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms