Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.5□□□□□ -0.09
Msh2P43247 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh2P43247 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Msh2P43247 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Msh2P43247 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Msh2P43247 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Msh2P43247 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Msh2P43247 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Gm23935-201ENSMUST00000102303 57 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Gm24270-201ENSMUST00000102326 57 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.49□□□□□ -0.09
Msh2P43247 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Rprl2-201ENSMUST00000157150 290 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Gm24245-201ENSMUST00000157318 57 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.49□□□□□ -0.09
Msh2P43247 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.49□□□□□ -0.09
Msh2P43247 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Msh2P43247 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Msh2P43247 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.49□□□□□ -0.09
Msh2P43247 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Msh2P43247 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh2P43247 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Gm13365-201ENSMUST00000121188 973 ntBASIC14.48□□□□□ -0.09
Msh2P43247 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Olfr286-202ENSMUST00000205305 969 ntBASIC14.48□□□□□ -0.09
Msh2P43247 Gm18057-201ENSMUST00000208220 503 ntBASIC14.48□□□□□ -0.09
Msh2P43247 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Msh2P43247 Chchd1-203ENSMUST00000224633 557 ntBASIC14.48□□□□□ -0.09
Msh2P43247 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Msh2P43247 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.48□□□□□ -0.09
Msh2P43247 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh2P43247 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.47□□□□□ -0.09
Msh2P43247 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh2P43247 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Msh2P43247 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms