Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm44486-201ENSMUST00000198508 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Gm44314-201ENSMUST00000199263 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Gm44394-201ENSMUST00000199558 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Gm44484-201ENSMUST00000199873 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Gm44466-201ENSMUST00000200264 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Gm44359-201ENSMUST00000200671 138 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Mmp9P41245 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.81□□□□□ -0.52
Mmp9P41245 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.81□□□□□ -0.52
Mmp9P41245 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Mmp9P41245 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Mmp9P41245 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.81□□□□□ -0.52
Mmp9P41245 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Mmp9P41245 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Mmp9P41245 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.8□□□□□ -0.52
Mmp9P41245 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.8□□□□□ -0.52
Mmp9P41245 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.8□□□□□ -0.52
Mmp9P41245 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Mmp9P41245 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Mmp9P41245 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Mmp9P41245 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Mmp9P41245 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.79□□□□□ -0.52
Mmp9P41245 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Gm14822-201ENSMUST00000122247 291 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.79□□□□□ -0.52
Mmp9P41245 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Mmp9P41245 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mmp9P41245 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms