Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Cxcl12P40224 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.36□□□□□ -0.11
Cxcl12P40224 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl12P40224 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cxcl12P40224 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Mir686-201ENSMUST00000102174 109 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm13369-201ENSMUST00000119442 987 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm25927-201ENSMUST00000175058 117 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm26927-201ENSMUST00000182385 965 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm5363-201ENSMUST00000211927 938 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.35□□□□□ -0.11
Cxcl12P40224 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
Cxcl12P40224 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cxcl12P40224 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm2383-201ENSMUST00000181461 807 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.34□□□□□ -0.11
Cxcl12P40224 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cxcl12P40224 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcl12P40224 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcl12P40224 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcl12P40224 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcl12P40224 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcl12P40224 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcl12P40224 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms