Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14□□□□□ -0.17
LdlrP35951 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LdlrP35951 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LdlrP35951 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14□□□□□ -0.17
LdlrP35951 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.99□□□□□ -0.17
LdlrP35951 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LdlrP35951 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.99□□□□□ -0.17
LdlrP35951 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Gm43125-201ENSMUST00000201724 730 ntBASIC13.99□□□□□ -0.17
LdlrP35951 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.99□□□□□ -0.17
LdlrP35951 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.99□□□□□ -0.17
LdlrP35951 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LdlrP35951 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LdlrP35951 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LdlrP35951 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LdlrP35951 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LdlrP35951 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.98□□□□□ -0.17
LdlrP35951 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.98□□□□□ -0.17
LdlrP35951 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LdlrP35951 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LdlrP35951 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LdlrP35951 Gm22175-201ENSMUST00000175007 78 ntBASIC13.98□□□□□ -0.17
LdlrP35951 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.98□□□□□ -0.17
LdlrP35951 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.98□□□□□ -0.17
LdlrP35951 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.98□□□□□ -0.17
LdlrP35951 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.98□□□□□ -0.17
LdlrP35951 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.98□□□□□ -0.17
LdlrP35951 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.98□□□□□ -0.17
LdlrP35951 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LdlrP35951 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LdlrP35951 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LdlrP35951 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.97□□□□□ -0.17
LdlrP35951 Mir449b-201ENSMUST00000104833 80 ntBASIC13.97□□□□□ -0.17
LdlrP35951 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms