Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Foxa1P35582 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13□□□□□ -0.33
Foxa1P35582 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Gm15460-201ENSMUST00000118147 391 ntBASIC13□□□□□ -0.33
Foxa1P35582 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
Foxa1P35582 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13□□□□□ -0.33
Foxa1P35582 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Foxa1P35582 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Foxa1P35582 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Foxa1P35582 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.99□□□□□ -0.33
Foxa1P35582 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Foxa1P35582 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Foxa1P35582 Gm27321-201ENSMUST00000185021 205 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Gm43703-201ENSMUST00000200523 763 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Gm7775-201ENSMUST00000218871 853 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Gm9063-201ENSMUST00000223299 582 ntBASIC12.99□□□□□ -0.33
Foxa1P35582 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxa1P35582 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Foxa1P35582 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Foxa1P35582 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.98□□□□□ -0.33
Foxa1P35582 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxa1P35582 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxa1P35582 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Foxa1P35582 Gm37714-201ENSMUST00000194742 342 ntBASIC12.98□□□□□ -0.33
Foxa1P35582 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxa1P35582 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Foxa1P35582 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Foxa1P35582 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.98□□□□□ -0.33
Foxa1P35582 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Foxa1P35582 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxa1P35582 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms