Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.97□□□□□ -0.33
Nedd8P29595 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nedd8P29595 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nedd8P29595 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nedd8P29595 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Nedd8P29595 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.96□□□□□ -0.33
Nedd8P29595 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nedd8P29595 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.96□□□□□ -0.33
Nedd8P29595 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.96□□□□□ -0.33
Nedd8P29595 Gm27646-201ENSMUST00000183989 110 ntBASIC12.96□□□□□ -0.33
Nedd8P29595 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.96□□□□□ -0.33
Nedd8P29595 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.96□□□□□ -0.33
Nedd8P29595 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nedd8P29595 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nedd8P29595 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.96□□□□□ -0.34
Nedd8P29595 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.96□□□□□ -0.34
Nedd8P29595 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Nedd8P29595 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nedd8P29595 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nedd8P29595 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nedd8P29595 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nedd8P29595 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nedd8P29595 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Nedd8P29595 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nedd8P29595 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.95□□□□□ -0.34
Nedd8P29595 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Olfr286-202ENSMUST00000205305 969 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.95□□□□□ -0.34
Nedd8P29595 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.95□□□□□ -0.34
Nedd8P29595 Gm18032-201ENSMUST00000222541 538 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nedd8P29595 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Nedd8P29595 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.95□□□□□ -0.34
Nedd8P29595 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nedd8P29595 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nedd8P29595 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 Gm13836-201ENSMUST00000121159 501 ntBASIC12.94□□□□□ -0.34
Nedd8P29595 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.94□□□□□ -0.34
Nedd8P29595 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms