Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Pde6aP27664 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pde6aP27664 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Pde6aP27664 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Gm25925-201ENSMUST00000158314 306 ntBASIC16.28■□□□□ 0.2
Pde6aP27664 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Gm9522-201ENSMUST00000182394 926 ntBASIC16.28■□□□□ 0.2
Pde6aP27664 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pde6aP27664 Gm29741-201ENSMUST00000192667 421 ntBASIC16.28■□□□□ 0.2
Pde6aP27664 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.28■□□□□ 0.2
Pde6aP27664 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.28■□□□□ 0.2
Pde6aP27664 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Pde6aP27664 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6aP27664 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.27■□□□□ 0.2
Pde6aP27664 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pde6aP27664 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Pde6aP27664 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pde6aP27664 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Gm14057-201ENSMUST00000120631 482 ntBASIC16.27■□□□□ 0.2
Pde6aP27664 Gm15321-201ENSMUST00000121290 288 ntBASIC16.27■□□□□ 0.2
Pde6aP27664 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pde6aP27664 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pde6aP27664 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.27■□□□□ 0.2
Pde6aP27664 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pde6aP27664 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.27■□□□□ 0.2
Pde6aP27664 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6aP27664 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.27■□□□□ 0.19
Pde6aP27664 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.27■□□□□ 0.19
Pde6aP27664 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6aP27664 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pde6aP27664 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Syt7-204ENSMUST00000223586 1344 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.26■□□□□ 0.19
Pde6aP27664 Gm24694-201ENSMUST00000180054 110 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Gm4804-201ENSMUST00000182234 999 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Gm2445-201ENSMUST00000182798 989 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Gm27663-201ENSMUST00000184839 110 ntBASIC16.26■□□□□ 0.19
Pde6aP27664 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6aP27664 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms