Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.73□□□□□ -0.53
Col8a2P25318 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.73□□□□□ -0.53
Col8a2P25318 Gm12138-201ENSMUST00000122180 951 ntBASIC11.73□□□□□ -0.53
Col8a2P25318 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Gm21470-201ENSMUST00000187680 696 ntBASIC11.73□□□□□ -0.53
Col8a2P25318 Gm37714-201ENSMUST00000194742 342 ntBASIC11.73□□□□□ -0.53
Col8a2P25318 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Col8a2P25318 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.73□□□□□ -0.53
Col8a2P25318 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col8a2P25318 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Col8a2P25318 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col8a2P25318 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Col8a2P25318 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col8a2P25318 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm15393-201ENSMUST00000120499 219 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.72□□□□□ -0.53
Col8a2P25318 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Mir497b-201ENSMUST00000093601 125 ntBASIC11.72□□□□□ -0.53
Col8a2P25318 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col8a2P25318 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Col8a2P25318 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col8a2P25318 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.71□□□□□ -0.53
Col8a2P25318 Gm11424-201ENSMUST00000121929 829 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Gm23984-201ENSMUST00000157139 203 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Col8a2P25318 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Gm28760-201ENSMUST00000185995 736 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms