Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
NdnP25233 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
NdnP25233 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NdnP25233 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NdnP25233 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NdnP25233 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
NdnP25233 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NdnP25233 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NdnP25233 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NdnP25233 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
NdnP25233 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.28□□□□□ -0.6
NdnP25233 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.28□□□□□ -0.6
NdnP25233 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
NdnP25233 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.27□□□□□ -0.6
NdnP25233 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.27□□□□□ -0.6
NdnP25233 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NdnP25233 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
NdnP25233 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
NdnP25233 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
NdnP25233 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.27□□□□□ -0.6
NdnP25233 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NdnP25233 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
NdnP25233 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Gm14722-201ENSMUST00000118943 689 ntBASIC11.27□□□□□ -0.61
NdnP25233 Gm13312-201ENSMUST00000119631 718 ntBASIC11.27□□□□□ -0.61
NdnP25233 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.27□□□□□ -0.61
NdnP25233 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
NdnP25233 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NdnP25233 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
NdnP25233 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
NdnP25233 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
NdnP25233 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NdnP25233 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
NdnP25233 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
NdnP25233 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
NdnP25233 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Celf4-206ENSMUST00000224553 1729 ntBASIC11.26□□□□□ -0.61
NdnP25233 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
NdnP25233 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NdnP25233 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NdnP25233 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms