Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.24■□□□□ 0.19
Col1a1P11087 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col1a1P11087 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col1a1P11087 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Gm11618-201ENSMUST00000117946 267 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Gm15808-201ENSMUST00000119046 604 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.23■□□□□ 0.19
Col1a1P11087 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Col1a1P11087 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.23■□□□□ 0.19
Col1a1P11087 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.23■□□□□ 0.19
Col1a1P11087 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col1a1P11087 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col1a1P11087 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col1a1P11087 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col1a1P11087 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Gm12241-201ENSMUST00000118330 726 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.22■□□□□ 0.19
Col1a1P11087 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col1a1P11087 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.22■□□□□ 0.19
Col1a1P11087 Gm13786-201ENSMUST00000122371 333 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Gm37466-201ENSMUST00000195692 652 ntBASIC16.22■□□□□ 0.19
Col1a1P11087 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.22■□□□□ 0.19
Col1a1P11087 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col1a1P11087 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Col1a1P11087 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Col1a1P11087 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col1a1P11087 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col1a1P11087 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Col1a1P11087 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Col1a1P11087 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.21■□□□□ 0.19
Col1a1P11087 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.21■□□□□ 0.19
Col1a1P11087 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col1a1P11087 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.21■□□□□ 0.19
Col1a1P11087 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Col1a1P11087 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Col1a1P11087 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col1a1P11087 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col1a1P11087 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col1a1P11087 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col1a1P11087 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.2■□□□□ 0.18
Col1a1P11087 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col1a1P11087 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms