Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccl3P10855 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccl3P10855 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.36□□□□□ -0.43
Ccl3P10855 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl3P10855 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccl3P10855 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccl3P10855 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ccl3P10855 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccl3P10855 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm24644-201ENSMUST00000157114 139 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 Gm40466-201ENSMUST00000212174 422 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccl3P10855 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.35□□□□□ -0.43
Ccl3P10855 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl3P10855 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ccl3P10855 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl3P10855 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.34□□□□□ -0.43
Ccl3P10855 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Gm29741-201ENSMUST00000192667 421 ntBASIC12.34□□□□□ -0.43
Ccl3P10855 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.34□□□□□ -0.43
Ccl3P10855 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.34□□□□□ -0.43
Ccl3P10855 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccl3P10855 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl3P10855 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms