Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.88□□□□□ -0.67
Ccl1P10146 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.88□□□□□ -0.67
Ccl1P10146 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccl1P10146 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.88□□□□□ -0.67
Ccl1P10146 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.88□□□□□ -0.67
Ccl1P10146 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.88□□□□□ -0.67
Ccl1P10146 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccl1P10146 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ccl1P10146 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccl1P10146 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccl1P10146 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Gm15372-201ENSMUST00000120729 834 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Gm11780-201ENSMUST00000136880 516 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Gm25925-201ENSMUST00000158314 306 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Gm2451-201ENSMUST00000199447 999 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Gm10290-201ENSMUST00000200451 999 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccl1P10146 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.87□□□□□ -0.67
Ccl1P10146 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccl1P10146 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl1P10146 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccl1P10146 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms