Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm44719-201ENSMUST00000206404 149 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm46209-201ENSMUST00000217912 553 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm4804-201ENSMUST00000182234 999 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm44872-201ENSMUST00000207864 420 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.21□□□□□ -0.45
PtcraP0C6B2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PtcraP0C6B2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PtcraP0C6B2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm12585-201ENSMUST00000117307 290 ntBASIC12.2□□□□□ -0.46
PtcraP0C6B2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm5867-201ENSMUST00000063197 592 ntBASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PtcraP0C6B2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms