Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm12209-201ENSMUST00000120089 596 ntBASIC14.84□□□□□ -0.03
Hoxc8P09025 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc8P09025 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Gm5370-201ENSMUST00000187187 574 ntBASIC14.84□□□□□ -0.03
Hoxc8P09025 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc8P09025 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc8P09025 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxc8P09025 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc8P09025 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Hoxc8P09025 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.83□□□□□ -0.03
Hoxc8P09025 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Hoxc8P09025 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.03
Hoxc8P09025 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc8P09025 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.83□□□□□ -0.04
Hoxc8P09025 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm27682-201ENSMUST00000183930 110 ntBASIC14.83□□□□□ -0.04
Hoxc8P09025 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm26315-201ENSMUST00000083890 321 ntBASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc8P09025 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.83□□□□□ -0.04
Hoxc8P09025 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc8P09025 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Gm19309-201ENSMUST00000218295 205 ntBASIC14.82□□□□□ -0.04
Hoxc8P09025 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.82□□□□□ -0.04
Hoxc8P09025 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc8P09025 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc8P09025 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.81□□□□□ -0.04
Hoxc8P09025 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.81□□□□□ -0.04
Hoxc8P09025 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.81□□□□□ -0.04
Hoxc8P09025 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms