Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.89□□□□□ -0.03
TnfP06804 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TnfP06804 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TnfP06804 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TnfP06804 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.88□□□□□ -0.03
TnfP06804 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.88□□□□□ -0.03
TnfP06804 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.88□□□□□ -0.03
TnfP06804 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.88□□□□□ -0.03
TnfP06804 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.88□□□□□ -0.03
TnfP06804 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TnfP06804 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TnfP06804 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.88□□□□□ -0.03
TnfP06804 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TnfP06804 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TnfP06804 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.87□□□□□ -0.03
TnfP06804 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TnfP06804 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TnfP06804 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TnfP06804 Gm24420-201ENSMUST00000176676 59 ntBASIC14.87□□□□□ -0.03
TnfP06804 Gm29741-201ENSMUST00000192667 421 ntBASIC14.87□□□□□ -0.03
TnfP06804 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.87□□□□□ -0.03
TnfP06804 Gm45384-201ENSMUST00000210451 277 ntBASIC14.87□□□□□ -0.03
TnfP06804 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.87□□□□□ -0.03
TnfP06804 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.87□□□□□ -0.03
TnfP06804 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.87□□□□□ -0.03
TnfP06804 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TnfP06804 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TnfP06804 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.86□□□□□ -0.03
TnfP06804 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.86□□□□□ -0.03
TnfP06804 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TnfP06804 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.86□□□□□ -0.03
TnfP06804 Gm11918-201ENSMUST00000121660 179 ntBASIC14.86□□□□□ -0.03
TnfP06804 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Gm8584-201ENSMUST00000171982 758 ntBASIC14.86□□□□□ -0.03
TnfP06804 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.86□□□□□ -0.03
TnfP06804 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TnfP06804 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TnfP06804 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms