Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.75□□□□□ -0.53
CfdP03953 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Gm2272-201ENSMUST00000194903 582 ntBASIC11.75□□□□□ -0.53
CfdP03953 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.75□□□□□ -0.53
CfdP03953 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.75□□□□□ -0.53
CfdP03953 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CfdP03953 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.74□□□□□ -0.53
CfdP03953 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.74□□□□□ -0.53
CfdP03953 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CfdP03953 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Gm5479-201ENSMUST00000160578 435 ntBASIC11.74□□□□□ -0.53
CfdP03953 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.74□□□□□ -0.53
CfdP03953 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.74□□□□□ -0.53
CfdP03953 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.74□□□□□ -0.53
CfdP03953 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CfdP03953 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.74□□□□□ -0.53
CfdP03953 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.74□□□□□ -0.53
CfdP03953 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CfdP03953 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CfdP03953 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.73□□□□□ -0.53
CfdP03953 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CfdP03953 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.73□□□□□ -0.53
CfdP03953 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CfdP03953 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CfdP03953 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms