Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.87□□□□□ -0.35
P01852 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.87□□□□□ -0.35
P01852 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.87□□□□□ -0.35
P01852 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.87□□□□□ -0.35
P01852 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P01852 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.87□□□□□ -0.35
P01852 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
P01852 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.87□□□□□ -0.35
P01852 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P01852 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.86□□□□□ -0.35
P01852 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
P01852 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.86□□□□□ -0.35
P01852 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P01852 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
P01852 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
P01852 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.86□□□□□ -0.35
P01852 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.86□□□□□ -0.35
P01852 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.86□□□□□ -0.35
P01852 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P01852 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P01852 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.85□□□□□ -0.35
P01852 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P01852 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.85□□□□□ -0.35
P01852 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.85□□□□□ -0.35
P01852 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P01852 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P01852 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Gm15957-201ENSMUST00000118893 974 ntBASIC12.85□□□□□ -0.35
P01852 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.85□□□□□ -0.35
P01852 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.85□□□□□ -0.35
P01852 Gm12428-201ENSMUST00000119844 727 ntBASIC12.85□□□□□ -0.35
P01852 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.85□□□□□ -0.35
P01852 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
P01852 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Gm27321-201ENSMUST00000185021 205 ntBASIC12.85□□□□□ -0.35
P01852 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P01852 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.85□□□□□ -0.35
P01852 Gm20949-201ENSMUST00000206478 952 ntBASIC12.85□□□□□ -0.35
P01852 Gm46209-201ENSMUST00000217912 553 ntBASIC12.85□□□□□ -0.35
P01852 Gm9063-201ENSMUST00000223299 582 ntBASIC12.85□□□□□ -0.35
P01852 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
P01852 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01852 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms