Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
TcraP01849 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
TcraP01849 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
TcraP01849 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.26□□□□□ -0.77
TcraP01849 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
TcraP01849 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.26□□□□□ -0.77
TcraP01849 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.26□□□□□ -0.77
TcraP01849 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
TcraP01849 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TcraP01849 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
TcraP01849 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.25□□□□□ -0.77
TcraP01849 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.25□□□□□ -0.77
TcraP01849 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
TcraP01849 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.25□□□□□ -0.77
TcraP01849 Gm15358-201ENSMUST00000119249 520 ntBASIC10.25□□□□□ -0.77
TcraP01849 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.25□□□□□ -0.77
TcraP01849 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.25□□□□□ -0.77
TcraP01849 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.25□□□□□ -0.77
TcraP01849 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.25□□□□□ -0.77
TcraP01849 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.25□□□□□ -0.77
TcraP01849 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.25□□□□□ -0.77
TcraP01849 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.25□□□□□ -0.77
TcraP01849 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TcraP01849 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
TcraP01849 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.24□□□□□ -0.77
TcraP01849 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms