Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
P01788 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.11□□□□□ -0.63
P01788 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.1□□□□□ -0.63
P01788 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P01788 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
P01788 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P01788 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.1□□□□□ -0.63
P01788 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.1□□□□□ -0.63
P01788 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Gm27920-201ENSMUST00000183953 96 ntBASIC11.1□□□□□ -0.63
P01788 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
P01788 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
P01788 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P01788 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.1□□□□□ -0.63
P01788 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.1□□□□□ -0.63
P01788 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01788 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.09□□□□□ -0.63
P01788 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.09□□□□□ -0.63
P01788 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01788 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P01788 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01788 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.09□□□□□ -0.63
P01788 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.09□□□□□ -0.63
P01788 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.09□□□□□ -0.63
P01788 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.09□□□□□ -0.63
P01788 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.09□□□□□ -0.63
P01788 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.09□□□□□ -0.63
P01788 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.09□□□□□ -0.63
P01788 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P01788 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.09□□□□□ -0.63
P01788 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01788 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01788 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms