Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a20bO88575 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a20bO88575 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm12203-201ENSMUST00000118235 598 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm12209-201ENSMUST00000120089 596 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Mir5132-201ENSMUST00000175166 71 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm42550-201ENSMUST00000201553 960 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm3786-201ENSMUST00000202659 378 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.24■□□□□ 0.03
Slc6a20bO88575 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a20bO88575 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Mir877-201ENSMUST00000104738 85 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm38341-201ENSMUST00000195357 515 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm42627-201ENSMUST00000197347 224 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm18935-201ENSMUST00000212692 664 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Snora73a-201ENSMUST00000082453 205 ntBASIC15.23■□□□□ 0.03
Slc6a20bO88575 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a20bO88575 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Gm26083-201ENSMUST00000157904 193 ntBASIC15.22■□□□□ 0.03
Slc6a20bO88575 Gm4271-201ENSMUST00000174444 973 ntBASIC15.22■□□□□ 0.03
Slc6a20bO88575 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a20bO88575 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.22■□□□□ 0.03
Slc6a20bO88575 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.22■□□□□ 0.03
Slc6a20bO88575 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms