Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Pde6dO55057 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pde6dO55057 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pde6dO55057 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.07□□□□□ -0.64
Pde6dO55057 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pde6dO55057 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Pde6dO55057 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pde6dO55057 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pde6dO55057 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.06□□□□□ -0.64
Pde6dO55057 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.06□□□□□ -0.64
Pde6dO55057 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm22240-201ENSMUST00000175225 82 ntBASIC11.06□□□□□ -0.64
Pde6dO55057 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.06□□□□□ -0.64
Pde6dO55057 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.06□□□□□ -0.64
Pde6dO55057 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.06□□□□□ -0.64
Pde6dO55057 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.06□□□□□ -0.64
Pde6dO55057 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Pde6dO55057 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.06□□□□□ -0.64
Pde6dO55057 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Pde6dO55057 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pde6dO55057 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Pde6dO55057 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.05□□□□□ -0.64
Pde6dO55057 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.05□□□□□ -0.64
Pde6dO55057 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Pde6dO55057 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.05□□□□□ -0.64
Pde6dO55057 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.05□□□□□ -0.64
Pde6dO55057 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.05□□□□□ -0.64
Pde6dO55057 Gm17808-201ENSMUST00000200859 894 ntBASIC11.05□□□□□ -0.64
Pde6dO55057 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.05□□□□□ -0.64
Pde6dO55057 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Pde6dO55057 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms