Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC12.78□□□□□ -0.36
Dkk1O54908 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.78□□□□□ -0.36
Dkk1O54908 AC167192.4-201ENSMUST00000224087 993 ntBASIC12.78□□□□□ -0.36
Dkk1O54908 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Dkk1O54908 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Dkk1O54908 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Dkk1O54908 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Dkk1O54908 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.77□□□□□ -0.36
Dkk1O54908 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.77□□□□□ -0.36
Dkk1O54908 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Dkk1O54908 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Dkk1O54908 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Dkk1O54908 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.77□□□□□ -0.36
Dkk1O54908 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.77□□□□□ -0.36
Dkk1O54908 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.77□□□□□ -0.37
Dkk1O54908 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm12757-201ENSMUST00000119465 800 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.77□□□□□ -0.37
Dkk1O54908 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm19066-201ENSMUST00000193232 1078 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.77□□□□□ -0.37
Dkk1O54908 Ighv10-2-201ENSMUST00000195182 298 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm45612-201ENSMUST00000211320 160 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 AC154219.1-201ENSMUST00000220764 1262 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Dkk1O54908 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.77□□□□□ -0.37
Dkk1O54908 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.77□□□□□ -0.37
Dkk1O54908 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Dkk1O54908 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Dkk1O54908 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC12.76□□□□□ -0.37
Dkk1O54908 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC12.76□□□□□ -0.37
Dkk1O54908 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.76□□□□□ -0.37
Dkk1O54908 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm12096-201ENSMUST00000121149 829 ntBASIC12.76□□□□□ -0.37
Dkk1O54908 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC12.76□□□□□ -0.37
Dkk1O54908 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Dkk1O54908 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.76□□□□□ -0.37
Dkk1O54908 Gm38320-201ENSMUST00000192767 1281 ntBASIC12.76□□□□□ -0.37
Dkk1O54908 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Dkk1O54908 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC12.76□□□□□ -0.37
Dkk1O54908 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC12.76□□□□□ -0.37
Dkk1O54908 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC12.76□□□□□ -0.37
Dkk1O54908 Gm5178-201ENSMUST00000219380 898 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms