Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.12□□□□□ -0.63
Efnb3O35393 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Efnb3O35393 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.12□□□□□ -0.63
Efnb3O35393 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Efnb3O35393 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Efnb3O35393 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Efnb3O35393 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.11□□□□□ -0.63
Efnb3O35393 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Efnb3O35393 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.11□□□□□ -0.63
Efnb3O35393 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.11□□□□□ -0.63
Efnb3O35393 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.11□□□□□ -0.63
Efnb3O35393 Gm18041-201ENSMUST00000218210 618 ntBASIC11.11□□□□□ -0.63
Efnb3O35393 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Efnb3O35393 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.11□□□□□ -0.63
Efnb3O35393 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Efnb3O35393 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Efnb3O35393 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Efnb3O35393 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Efnb3O35393 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.1□□□□□ -0.63
Efnb3O35393 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.1□□□□□ -0.63
Efnb3O35393 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.1□□□□□ -0.63
Efnb3O35393 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.1□□□□□ -0.63
Efnb3O35393 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm15590-201ENSMUST00000078419 552 ntBASIC11.1□□□□□ -0.63
Efnb3O35393 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.1□□□□□ -0.63
Efnb3O35393 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.1□□□□□ -0.63
Efnb3O35393 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.1□□□□□ -0.63
Efnb3O35393 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Efnb3O35393 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms